{
  "_id": "6a1f08efb401979e7341c233",
  "Package": "perturbR",
  "Type": "Package",
  "Title": "Random Perturbation of Count Matrices",
  "Version": "0.1.3",
  "Author": "KM Gates [aut, cre], Zachary Fisher [aut], Cara Arizmendi [aut]",
  "Maintainer": "KM Gates <gateskm@email.unc.edu>",
  "Description": "The perturbR() function incrementally perturbs network\nedges (using the rewireR function)and compares the resulting\ncommunity detection solutions from the rewired networks with\nthe solution found for the original network. These comparisons\naid in understanding the stability of the original solution.\nThe package requires symmetric, weighted (specifically, count)\nmatrices/networks.",
  "License": "GPL-2",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "6.1.1",
  "VignetteBuilder": "knitr",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-18 06:17:10 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "libglpk-dev libxml2-dev",
  "Repository": "https://kgates.r-universe.dev",
  "Date/Publication": "2019-02-19 08:30:03 UTC",
  "RemoteUrl": "https://github.com/cran/perturbR",
  "RemoteRef": "HEAD",
  "RemoteSha": "8a8eba5b05691061cabddc9f258613ec2968174d",
  "MD5sum": "9f8102c3120bb65a8a712636673408f4",
  "_user": "kgates",
  "_type": "src",
  "_file": "perturbR_0.1.3.tar.gz",
  "_fileid": "f5022381f67a121c2b2269872f58e9e759197384c259c84ec28197a22a78605b",
  "_filesize": 479207,
  "_sha256": "f5022381f67a121c2b2269872f58e9e759197384c259c84ec28197a22a78605b",
  "_created": "2026-05-18T06:17:10.000Z",
  "_published": "2026-06-02T16:46:39.095Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79124050781,
      "time": 121,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7050766756"
    },
    {
      "job": 79124050722,
      "time": 173,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7050778832"
    },
    {
      "job": 79124050932,
      "time": 194,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7050776446"
    },
    {
      "job": 79124050312,
      "time": 170,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7050769623"
    },
    {
      "job": 79124049988,
      "time": 175,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7050740386"
    },
    {
      "job": 79124049901,
      "time": 115,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7364170125"
    },
    {
      "job": 79124050921,
      "time": 105,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7050763213"
    },
    {
      "job": 79124050934,
      "time": 91,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7050760106"
    },
    {
      "job": 79124050672,
      "time": 80,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7050757819"
    }
  ],
  "_buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/perturbR",
  "_commit": {
    "id": "8a8eba5b05691061cabddc9f258613ec2968174d",
    "author": "KM Gates <gateskm@email.unc.edu>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1.3\n",
    "time": 1550565003
  },
  "_maintainer": {
    "name": "KM Gates",
    "email": "gateskm@email.unc.edu",
    "login": "kgates",
    "description": "",
    "uuid": 12171785
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "igraph",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 2,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "kgates",
      "count": 4,
      "uuid": 12171785
    }
  ],
  "_userbio": {
    "uuid": 12171785,
    "type": "user",
    "name": "Kathleen Katie Gates "
  },
  "_downloads": {
    "count": 310,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/perturbR"
  },
  "_searchresults": 12,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/perturbR.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_realowner": "kgates",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2017-12-01"
    },
    {
      "version": "0.1.1",
      "date": "2018-03-21"
    },
    {
      "version": "0.1.2",
      "date": "2018-07-27"
    },
    {
      "version": "0.1.3",
      "date": "2019-02-19"
    }
  ],
  "_exports": [
    "perturbR",
    "rewireR"
  ],
  "_datasets": [
    {
      "name": "exampledata",
      "title": "Example, symmetric weighted count matrix",
      "object": "exampledata",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "X1",
        "X2",
        "X3",
        "X4",
        "X5",
        "X6",
        "X7",
        "X8",
        "X9",
        "X10",
        "X11",
        "X12",
        "X13",
        "X14",
        "X15",
        "X16",
        "X17",
        "X18",
        "X19",
        "X20",
        "X21",
        "X22",
        "X23",
        "X24",
        "X25"
      ],
      "rows": 25,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "perturbR-package",
      "title": "Perturb Networks",
      "topics": [
        "perturbR-package"
      ]
    },
    {
      "page": "exampledata",
      "title": "Example, symmetric weighted count matrix",
      "topics": [
        "exampledata"
      ]
    },
    {
      "page": "perturbR",
      "title": "Perturb networks and evaluate subgroup structures.",
      "topics": [
        "evalClust",
        "perturbR"
      ]
    },
    {
      "page": "rewireR",
      "title": "Rewire graph by randomly assigning new values for a given degree of perturbation.",
      "topics": [
        "rewireR"
      ]
    }
  ],
  "_readme": "https://github.com/cran/perturbR/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "farver",
    "ggplot2",
    "glue",
    "gtable",
    "igraph",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "pkgconfig",
    "R6",
    "RColorBrewer",
    "rlang",
    "S7",
    "scales",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "perturbR-vignette.Rmd",
      "filename": "perturbR-vignette.html",
      "title": "The perturbR Vignette",
      "author": "KM Gates & ZF Fisher",
      "engine": "knitr::rmarkdown",
      "headings": [
        "<tt>perturbR</tt>",
        "Getting Started with <tt>perturbR</tt>",
        "Exploring <tt>perturbR</tt>  Output",
        "Approach 1: Comparison of Cluster Assignments",
        "Approach 2: Comparison of Modularity Values",
        "The modularity value from the solution on the original matrix:",
        "References"
      ],
      "created": "2018-07-27 16:10:03",
      "modified": "2018-07-27 16:10:03",
      "commits": 1
    }
  ],
  "_score": 3.5563025007672873,
  "_indexed": true,
  "_nocasepkg": "perturbr",
  "_universes": [
    "kgates"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-05-18T06:19:02.000Z",
      "distro": "noble",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "f3e4ad1f0e66672b062f4744f4082f53ca4ec2af195cc4de650d8e6bed1e9028",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.3",
      "date": "2026-05-18T06:19:53.000Z",
      "distro": "noble",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "3d77811f275ae04fe7dcd41a6d7d77b964b3a2cc79d52063929cb0efc198e6ff",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-05-18T06:19:49.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "e052a45c7da67d158348d0d5cce7e26dd7823c127187ef19e74799c708b1e9d7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.3",
      "date": "2026-05-18T06:19:17.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "ab11832306ff2bba774483b998c4eccbaefd3f516b15caf7e34fc6370ad336af",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-18T06:18:40.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "206cbeb7c7eb86b877c8850d2ecf437bc448981a09430b0f39df280b3f4b583f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-18T06:18:20.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "d11acff5aadbf53d8a10a2bf525f3b606b484d1b8aaf30eacbeea7f2d64fb557",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.3",
      "date": "2026-05-18T06:18:18.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "f92d1e071f7f3b69bae4fabf89f2075bfaa82f9a7e5256a83e8509ca152a41c8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.3",
      "date": "2026-06-02T16:46:16.000Z",
      "commit": "8a8eba5b05691061cabddc9f258613ec2968174d",
      "fileid": "2b812aaf2354d9b865efb4a193ee7b08cfdac30da5f04514e34246422187297b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/kgates/actions/runs/26016797709"
    }
  ]
}