Package: perturbR 0.1.3

perturbR: Random Perturbation of Count Matrices

The perturbR() function incrementally perturbs network edges (using the rewireR function)and compares the resulting community detection solutions from the rewired networks with the solution found for the original network. These comparisons aid in understanding the stability of the original solution. The package requires symmetric, weighted (specifically, count) matrices/networks.

Authors:KM Gates [aut, cre], Zachary Fisher [aut], Cara Arizmendi [aut]

perturbR_0.1.3.tar.gz
perturbR_0.1.3.zip(r-4.5)perturbR_0.1.3.zip(r-4.4)perturbR_0.1.3.zip(r-4.3)
perturbR_0.1.3.tgz(r-4.5-any)perturbR_0.1.3.tgz(r-4.4-any)perturbR_0.1.3.tgz(r-4.3-any)
perturbR_0.1.3.tar.gz(r-4.5-noble)perturbR_0.1.3.tar.gz(r-4.4-noble)
perturbR_0.1.3.tgz(r-4.4-emscripten)perturbR_0.1.3.tgz(r-4.3-emscripten)
perturbR.pdf |perturbR.html✨
perturbR/json (API)

# Install 'perturbR' in R:
install.packages('perturbR', repos = c('https://kgates.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.26 score 1 packages 12 scripts 247 downloads 2 exports 30 dependencies

Last updated 6 years agofrom:8a8eba5b05. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 16 2025
R-4.5-winOKMar 16 2025
R-4.5-macOKMar 16 2025
R-4.5-linuxOKMar 16 2025
R-4.4-winOKMar 16 2025
R-4.4-macOKMar 16 2025
R-4.4-linuxOKMar 16 2025
R-4.3-winOKMar 16 2025
R-4.3-macOKMar 16 2025

Exports:perturbRrewireR

Dependencies:clicolorspacecpp11fansifarverggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr

The perturbR Vignette

KM Gates & ZF Fisher

Rendered fromperturbR-vignette.Rmdusingknitr::rmarkdownon Mar 16 2025.

Last update: 2018-07-27
Started: 2018-07-27